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Pull request #21 opened
19:32:11 Connecting to https://api.github.com using GitHub Access Token
Connecting to https://api.github.com to check permissions of obtain list of ElMastro for OpenModelica/OMSens
Loading trusted files from base branch master at e3268e9e3ee9cf5129f6509351df084b2562be99 rather than bd73f685d83047c37773bc4c1ed933c4794642a8
Obtained Jenkinsfile from e3268e9e3ee9cf5129f6509351df084b2562be99
[Pipeline] Start of Pipeline
[Pipeline] stage
[Pipeline] { (test)
[Pipeline] parallel
[Pipeline] { (Branch: python3)
[Pipeline] stage
[Pipeline] { (python3)
[Pipeline] node
Running on ryzen-5950x-2-1 in /var/lib/jenkins1/ws/OMSens_PR-21
[Pipeline] {
[Pipeline] checkout
The recommended git tool is: git
using credential github
Cloning the remote Git repository
Cloning with configured refspecs honoured and without tags
Cloning repository https://github.com/OpenModelica/OMSens.git
 > git init /var/lib/jenkins1/ws/OMSens_PR-21 # timeout=10
Fetching upstream changes from https://github.com/OpenModelica/OMSens.git
 > git --version # timeout=10
 > git --version # 'git version 2.25.1'
using GIT_ASKPASS to set credentials GitHub Access Token
 > git fetch --no-tags --force --progress -- https://github.com/OpenModelica/OMSens.git +refs/pull/21/head:refs/remotes/origin/PR-21 +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config remote.origin.url https://github.com/OpenModelica/OMSens.git # timeout=10
 > git config --add remote.origin.fetch +refs/pull/21/head:refs/remotes/origin/PR-21 # timeout=10
 > git config --add remote.origin.fetch +refs/heads/master:refs/remotes/origin/master # timeout=10
Cleaning workspace
Fetching without tags
Merging remotes/origin/master commit e3268e9e3ee9cf5129f6509351df084b2562be99 into PR head commit bd73f685d83047c37773bc4c1ed933c4794642a8
Merge succeeded, producing bd73f685d83047c37773bc4c1ed933c4794642a8
Checking out Revision bd73f685d83047c37773bc4c1ed933c4794642a8 (PR-21)
Commit message: "Fixed obsolete *.getchildren command in modelica_interface/compiled_model.py"
First time build. Skipping changelog.
Cleaning workspace
 > git --version # timeout=10
 > git --version # 'git version 2.25.1'
 > git config remote.origin.url https://github.com/OpenModelica/OMSens.git # timeout=10
 > git rev-parse --verify HEAD # timeout=10
No valid HEAD. Skipping the resetting
 > git clean -fdx # timeout=10
Fetching upstream changes from https://github.com/OpenModelica/OMSens.git
using GIT_ASKPASS to set credentials GitHub Access Token
 > git fetch --no-tags --force --progress -- https://github.com/OpenModelica/OMSens.git +refs/pull/21/head:refs/remotes/origin/PR-21 +refs/heads/master:refs/remotes/origin/master # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f bd73f685d83047c37773bc4c1ed933c4794642a8 # timeout=10
 > git remote # timeout=10
 > git config --get remote.origin.url # timeout=10
using GIT_ASKPASS to set credentials GitHub Access Token
 > git merge e3268e9e3ee9cf5129f6509351df084b2562be99 # timeout=10
 > git rev-parse HEAD^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f bd73f685d83047c37773bc4c1ed933c4794642a8 # timeout=10
 > git branch -a -v --no-abbrev # timeout=10
 > git checkout -b PR-21 bd73f685d83047c37773bc4c1ed933c4794642a8 # timeout=10
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
[Pipeline] withEnv
[Pipeline] {
[Pipeline] isUnix
[Pipeline] readFile
[Pipeline] sh
+ docker build -t a35c269f9b048081719b7333a5202c9ea0457b5b --pull -f .jenkins/python3/Dockerfile .jenkins/python3
Sending build context to Docker daemon   2.56kB

Step 1/3 : FROM docker.openmodelica.org/build-deps:v1.16.2
v1.16.2: Pulling from build-deps
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Digest: sha256:ef85a65a4b895238f0080287981632dc1a0b144ee2d67b86a10e6cc9df150c9a
Status: Downloaded newer image for docker.openmodelica.org/build-deps:v1.16.2
 ---> 8c0f9eac200c
Step 2/3 : RUN apt-get update   && apt-get install -qy gnupg wget ca-certificates apt-transport-https sudo   && echo "deb https://build.openmodelica.org/omc/builds/linux/releases/1.14.2/ `lsb_release -sc`  release" > /etc/apt/sources.list.d/openmodelica.list   && wget https://build.openmodelica.org/apt/openmodelica.asc -O- | apt-key add -   && apt-get update   && apt-get install -qy --no-install-recommends omc omlib-modelica-3.2.2   && rm -rf /var/lib/apt/lists/*
 ---> Running in 022c5f0db4f1
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done.
done.
--2022-03-11 18:32:29--  https://build.openmodelica.org/apt/openmodelica.asc
Resolving build.openmodelica.org (build.openmodelica.org)... Warning: apt-key output should not be parsed (stdout is not a terminal)
192.36.54.111, 2001:6b0:6f:10::111
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Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  libomc libomcsimulation omc-common omlib-complex-3.2.2
  omlib-modelicaservices-3.2.2
Suggested packages:
  python-beautifulsoup
Recommended packages:
  omplot libsaxonb-java
The following NEW packages will be installed:
  libomc libomcsimulation omc omc-common omlib-complex-3.2.2
  omlib-modelica-3.2.2 omlib-modelicaservices-3.2.2
0 upgraded, 7 newly installed, 0 to remove and 274 not upgraded.
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Get:4 https://build.openmodelica.org/omc/builds/linux/releases/1.14.2 bionic/release amd64 omc amd64 1.14.2-1 [147 kB]
Get:5 https://build.openmodelica.org/omc/builds/linux/releases/1.14.2 bionic/release amd64 omlib-complex-3.2.2 all 3.2.2-168-g2541ab4-om1-1 [10.5 kB]
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Get:7 https://build.openmodelica.org/omc/builds/linux/releases/1.14.2 bionic/release amd64 omlib-modelica-3.2.2 all 3.2.2-168-g2541ab4-om3-1 [13.3 MB]
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Setting up omlib-complex-3.2.2 (3.2.2-168-g2541ab4-om1-1) ...
Setting up omlib-modelica-3.2.2 (3.2.2-168-g2541ab4-om3-1) ...
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Setting up omc (1.14.2-1) ...
Removing intermediate container 022c5f0db4f1
 ---> bb97c402565b
Step 3/3 : RUN pip3 install --no-cache pytest
 ---> Running in 598dc031c00e
Collecting pytest
  Downloading https://files.pythonhosted.org/packages/38/93/c7c0bd1e932b287fb948eb9ce5a3d6307c9fc619db1e199f8c8bc5dad95f/pytest-7.0.1-py3-none-any.whl (296kB)
Collecting attrs>=19.2.0 (from pytest)
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Collecting tomli>=1.0.0 (from pytest)
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Collecting iniconfig (from pytest)
  Downloading https://files.pythonhosted.org/packages/9b/dd/b3c12c6d707058fa947864b67f0c4e0c39ef8610988d7baea9578f3c48f3/iniconfig-1.1.1-py2.py3-none-any.whl
Collecting pluggy<2.0,>=0.12 (from pytest)
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Requirement already satisfied: packaging in /usr/local/lib/python3.6/dist-packages (from pytest)
Collecting importlib-metadata>=0.12; python_version < "3.8" (from pytest)
  Downloading https://files.pythonhosted.org/packages/a0/a1/b153a0a4caf7a7e3f15c2cd56c7702e2cf3d89b1b359d1f1c5e59d68f4ce/importlib_metadata-4.8.3-py3-none-any.whl
Requirement already satisfied: six in /usr/local/lib/python3.6/dist-packages (from packaging->pytest)
Requirement already satisfied: pyparsing>=2.0.2 in /usr/local/lib/python3.6/dist-packages (from packaging->pytest)
Collecting typing-extensions>=3.6.4; python_version < "3.8" (from importlib-metadata>=0.12; python_version < "3.8"->pytest)
  Downloading https://files.pythonhosted.org/packages/45/6b/44f7f8f1e110027cf88956b59f2fad776cca7e1704396d043f89effd3a0e/typing_extensions-4.1.1-py3-none-any.whl
Collecting zipp>=0.5 (from importlib-metadata>=0.12; python_version < "3.8"->pytest)
  Downloading https://files.pythonhosted.org/packages/bd/df/d4a4974a3e3957fd1c1fa3082366d7fff6e428ddb55f074bf64876f8e8ad/zipp-3.6.0-py3-none-any.whl
Installing collected packages: attrs, py, tomli, iniconfig, typing-extensions, zipp, importlib-metadata, pluggy, pytest
Successfully installed attrs-21.4.0 importlib-metadata-4.8.3 iniconfig-1.1.1 pluggy-1.0.0 py-1.11.0 pytest-7.0.1 tomli-1.2.3 typing-extensions-4.1.1 zipp-3.6.0
Removing intermediate container 598dc031c00e
 ---> e6b16bb47bce
Successfully built e6b16bb47bce
Successfully tagged a35c269f9b048081719b7333a5202c9ea0457b5b:latest
[Pipeline] isUnix
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
+ docker inspect -f . a35c269f9b048081719b7333a5202c9ea0457b5b
.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] withDockerContainer
ryzen-5950x-2-1 does not seem to be running inside a container
$ docker run -t -d -u 1001:1001 -w /var/lib/jenkins1/ws/OMSens_PR-21 -v /var/lib/jenkins1/ws/OMSens_PR-21:/var/lib/jenkins1/ws/OMSens_PR-21:rw,z -v /var/lib/jenkins1/ws/OMSens_PR-21@tmp:/var/lib/jenkins1/ws/OMSens_PR-21@tmp:rw,z -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** -e ******** a35c269f9b048081719b7333a5202c9ea0457b5b cat
$ docker top cb314706305ddb75915d8b93e2d7b095724d92b043393f9eb692c6ad7fb2b381 -eo pid,comm
[Pipeline] {
[Pipeline] sh
+ hostname
cb314706305d
[Pipeline] sh
+ HOME=/var/lib/jenkins1/ws/OMSens_PR-21 python3 setup.py install --user
running install
running bdist_egg
running egg_info
creating OMSens.egg-info
writing OMSens.egg-info/PKG-INFO
writing dependency_links to OMSens.egg-info/dependency_links.txt
writing requirements to OMSens.egg-info/requires.txt
writing top-level names to OMSens.egg-info/top_level.txt
writing manifest file 'OMSens.egg-info/SOURCES.txt'
reading manifest file 'OMSens.egg-info/SOURCES.txt'
writing manifest file 'OMSens.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
warning: install_lib: 'build/lib' does not exist -- no Python modules to install

creating build
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying OMSens.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying OMSens.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying OMSens.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying OMSens.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying OMSens.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
creating dist
creating 'dist/OMSens-1.0.0-py3.6.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing OMSens-1.0.0-py3.6.egg
Copying OMSens-1.0.0-py3.6.egg to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding OMSens 1.0.0 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/OMSens-1.0.0-py3.6.egg
Processing dependencies for OMSens==1.0.0
Searching for pandas==1.1.3
Reading https://pypi.org/simple/pandas/
Downloading https://files.pythonhosted.org/packages/a2/21/e10d65222d19a2537e3eb0df306686a9eabd08b3c98dd120e43720bf802d/pandas-1.1.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=ca31ac8578d48da354cf66a473d4d5ff99277ca71d321dc7ea4e6fad3c6bb0fd
Best match: pandas 1.1.3
Processing pandas-1.1.3-cp36-cp36m-manylinux1_x86_64.whl
Installing pandas-1.1.3-cp36-cp36m-manylinux1_x86_64.whl to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding pandas 1.1.3 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/pandas-1.1.3-py3.6-linux-x86_64.egg
Searching for matplotlib==3.3
Reading https://pypi.org/simple/matplotlib/
Downloading https://files.pythonhosted.org/packages/93/ae/81b1c98ae97350711adb021ee12ea678b37f608ec2faa35c3a7db11795fa/matplotlib-3.3.0-1-cp36-cp36m-manylinux1_x86_64.whl#sha256=f9753c6292d5a1fe46828feb38d1de1820e3ea109a5fea0b6ea1dca6e9d0b220
Best match: matplotlib 3.3.0
Processing matplotlib-3.3.0-1-cp36-cp36m-manylinux1_x86_64.whl
Installing matplotlib-3.3.0-1-cp36-cp36m-manylinux1_x86_64.whl to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding matplotlib 3.3.0 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/matplotlib-3.3.0-py3.6-linux-x86_64.egg
Searching for python-dateutil>=2.7.3
Reading https://pypi.org/simple/python-dateutil/
Downloading https://files.pythonhosted.org/packages/36/7a/87837f39d0296e723bb9b62bbb257d0355c7f6128853c78955f57342a56d/python_dateutil-2.8.2-py2.py3-none-any.whl#sha256=961d03dc3453ebbc59dbdea9e4e11c5651520a876d0f4db161e8674aae935da9
Best match: python-dateutil 2.8.2
Processing python_dateutil-2.8.2-py2.py3-none-any.whl
Installing python_dateutil-2.8.2-py2.py3-none-any.whl to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding python-dateutil 2.8.2 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/python_dateutil-2.8.2-py3.6.egg
Searching for pillow>=6.2.0
Reading https://pypi.org/simple/pillow/
Downloading https://files.pythonhosted.org/packages/03/a3/f61a9a7ff7969cdef2a6e0383a346eb327495d20d25a2de5a088dbb543a6/Pillow-9.0.1.tar.gz#sha256=6c8bc8238a7dfdaf7a75f5ec5a663f4173f8c367e5a39f87e720495e1eed75fa
Best match: Pillow 9.0.1
Processing Pillow-9.0.1.tar.gz
Writing /tmp/easy_install-l2y9u01d/Pillow-9.0.1/setup.cfg
Running Pillow-9.0.1/setup.py -q bdist_egg --dist-dir /tmp/easy_install-l2y9u01d/Pillow-9.0.1/egg-dist-tmp-sqtdjco5
warning: no files found matching '*.c'
warning: no files found matching '*.h'
warning: no files found matching '*.sh'
warning: no previously-included files found matching '.appveyor.yml'
warning: no previously-included files found matching '.clang-format'
warning: no previously-included files found matching '.coveragerc'
warning: no previously-included files found matching '.editorconfig'
warning: no previously-included files found matching '.readthedocs.yml'
warning: no previously-included files found matching 'codecov.yml'
warning: no previously-included files matching '.git*' found anywhere in distribution
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
no previously-included directories found matching '.ci'
--------------------------------------------------------------------
PIL SETUP SUMMARY
--------------------------------------------------------------------
version      Pillow 9.0.1
platform     linux 3.6.9 (default, Apr 18 2020, 01:56:04)
             [GCC 8.4.0]
--------------------------------------------------------------------
--- JPEG support available
*** OPENJPEG (JPEG2000) support not available
--- ZLIB (PNG/ZIP) support available
*** LIBIMAGEQUANT support not available
*** LIBTIFF support not available
*** FREETYPE2 support not available
*** RAQM (Text shaping) support not available
*** LITTLECMS2 support not available
*** WEBP support not available
*** WEBPMUX support not available
--- XCB (X protocol) support available
--------------------------------------------------------------------
To add a missing option, make sure you have the required
library and headers.
See https://pillow.readthedocs.io/en/latest/installation.html#building-from-source

To check the build, run the selftest.py script.

Moving Pillow-9.0.1-py3.6-linux-x86_64.egg to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding Pillow 9.0.1 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/Pillow-9.0.1-py3.6-linux-x86_64.egg
Searching for kiwisolver>=1.0.1
Reading https://pypi.org/simple/kiwisolver/
Downloading https://files.pythonhosted.org/packages/8e/87/259fde8cf07d06677f0a749cb157d079ebd00d40fe52faaab1a882a66159/kiwisolver-1.3.2.tar.gz#sha256=fc4453705b81d03568d5b808ad8f09c77c47534f6ac2e72e733f9ca4714aa75c
Best match: kiwisolver 1.3.2
Processing kiwisolver-1.3.2.tar.gz
Writing /tmp/easy_install-24kpmu_t/kiwisolver-1.3.2/setup.cfg
Running kiwisolver-1.3.2/setup.py -q bdist_egg --dist-dir /tmp/easy_install-24kpmu_t/kiwisolver-1.3.2/egg-dist-tmp-wuknqe3q
warning: no files found matching '*.png' under directory 'docs/source'
warning: manifest_maker: MANIFEST.in, line 11: unknown action 'recursive'

warning: manifest_maker: MANIFEST.in, line 12: unknown action 'recursive'

no previously-included directories found matching '.git'
no previously-included directories found matching 'dist'
no previously-included directories found matching 'build'
no previously-included directories found matching 'docs/build'
zip_safe flag not set; analyzing archive contents...
__pycache__.kiwisolver.cpython-36: module references __file__
creating /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/kiwisolver-1.3.2-py3.6-linux-x86_64.egg
Extracting kiwisolver-1.3.2-py3.6-linux-x86_64.egg to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding kiwisolver 1.3.2 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/kiwisolver-1.3.2-py3.6-linux-x86_64.egg
Searching for cycler>=0.10
Reading https://pypi.org/simple/cycler/
Downloading https://files.pythonhosted.org/packages/5c/f9/695d6bedebd747e5eb0fe8fad57b72fdf25411273a39791cde838d5a8f51/cycler-0.11.0-py3-none-any.whl#sha256=3a27e95f763a428a739d2add979fa7494c912a32c17c4c38c4d5f082cad165a3
Best match: cycler 0.11.0
Processing cycler-0.11.0-py3-none-any.whl
Installing cycler-0.11.0-py3-none-any.whl to /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages
Adding cycler 0.11.0 to easy-install.pth file

Installed /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/cycler-0.11.0-py3.6.egg
Searching for numpy==1.19.1
Best match: numpy 1.19.1
Adding numpy 1.19.1 to easy-install.pth file
Installing f2py script to /var/lib/jenkins1/ws/OMSens_PR-21/.local/bin
Installing f2py3 script to /var/lib/jenkins1/ws/OMSens_PR-21/.local/bin
Installing f2py3.6 script to /var/lib/jenkins1/ws/OMSens_PR-21/.local/bin

Using /usr/local/lib/python3.6/dist-packages
Searching for pytest==7.0.1
Best match: pytest 7.0.1
Adding pytest 7.0.1 to easy-install.pth file
Installing py.test script to /var/lib/jenkins1/ws/OMSens_PR-21/.local/bin
Installing pytest script to /var/lib/jenkins1/ws/OMSens_PR-21/.local/bin

Using /usr/local/lib/python3.6/dist-packages
Searching for six==1.14.0
Best match: six 1.14.0
Adding six 1.14.0 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for pytz==2019.3
Best match: pytz 2019.3
Adding pytz 2019.3 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for pyparsing==2.4.7
Best match: pyparsing 2.4.7
Adding pyparsing 2.4.7 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for attrs==21.4.0
Best match: attrs 21.4.0
Adding attrs 21.4.0 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for tomli==1.2.3
Best match: tomli 1.2.3
Adding tomli 1.2.3 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for importlib-metadata==4.8.3
Best match: importlib-metadata 4.8.3
Adding importlib-metadata 4.8.3 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for iniconfig==1.1.1
Best match: iniconfig 1.1.1
Adding iniconfig 1.1.1 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for pluggy==1.0.0
Best match: pluggy 1.0.0
Adding pluggy 1.0.0 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for py==1.11.0
Best match: py 1.11.0
Adding py 1.11.0 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for packaging==20.3
Best match: packaging 20.3
Adding packaging 20.3 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for zipp==3.6.0
Best match: zipp 3.6.0
Adding zipp 3.6.0 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Searching for typing-extensions==4.1.1
Best match: typing-extensions 4.1.1
Adding typing-extensions 4.1.1 to easy-install.pth file

Using /usr/local/lib/python3.6/dist-packages
Finished processing dependencies for OMSens==1.0.0
Rut.for:760:72:

               if(mod(i,20).eq.0)pause
                                                                        1
Warning: Deleted feature: PAUSE statement at (1)
Rut.for:764:72:

       pause
                                                                        1
Warning: Deleted feature: PAUSE statement at (1)
Rut.for:788:72:

       pause
                                                                        1
Warning: Deleted feature: PAUSE statement at (1)
Rut.for:1073:72:

 10    assign 30 to next
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
Rut.for:1077:16:

 20    go to next, (30,40,70,80)
                1
Warning: Deleted feature: Assigned GOTO statement at (1)
Rut.for:1079:72:

       assign 40 to next
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
Rut.for:1084:72:

       assign 70 to next
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
Rut.for:1087:72:

       assign 80 to next
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building extension "curvif_simplified" sources
creating /tmp/tmppx24ffrg/src.linux-x86_64-3.6
f2py options: []
f2py: curvif_simplified.pyf
Reading fortran codes...
	Reading file 'curvif_simplified.pyf' (format:free)
Post-processing...
	Block: __user__routines
			Block: obj_func
	Block: curvif_simplified
			Block: curvif_simplified
In: curvif_simplified.pyf:curvif_simplified:unknown_interface:curvif_simplified
get_useparameters: no module __user__routines info used by curvif_simplified
Post-processing (stage 2)...
Building modules...
	Constructing call-back function "cb_obj_func_in___user__routines"
	  def obj_func(x,[n]): return f
	Building module "curvif_simplified"...
		Constructing wrapper function "curvif_simplified"...
		  x_opt,f_opt = curvif_simplified(x0,obj_func,lower_bounds,upper_bounds,epsilon,[n,obj_func_extra_args])
	Wrote C/API module "curvif_simplified" to file "/tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.c"
  adding '/tmp/tmppx24ffrg/src.linux-x86_64-3.6/fortranobject.c' to sources.
  adding '/tmp/tmppx24ffrg/src.linux-x86_64-3.6' to include_dirs.
copying /usr/local/lib/python3.6/dist-packages/numpy/f2py/src/fortranobject.c -> /tmp/tmppx24ffrg/src.linux-x86_64-3.6
copying /usr/local/lib/python3.6/dist-packages/numpy/f2py/src/fortranobject.h -> /tmp/tmppx24ffrg/src.linux-x86_64-3.6
build_src: building npy-pkg config files
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Found executable /usr/bin/gfortran
customize Gnu95FCompiler
customize Gnu95FCompiler using build_ext
building 'curvif_simplified' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC

creating /tmp/tmppx24ffrg/tmp
creating /tmp/tmppx24ffrg/tmp/tmppx24ffrg
creating /tmp/tmppx24ffrg/tmp/tmppx24ffrg/src.linux-x86_64-3.6
compile options: '-I. -I/tmp/tmppx24ffrg/src.linux-x86_64-3.6 -I/usr/local/lib/python3.6/dist-packages/numpy/core/include -I/usr/include/python3.6m -c'
x86_64-linux-gnu-gcc: /tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.c
x86_64-linux-gnu-gcc: /tmp/tmppx24ffrg/src.linux-x86_64-3.6/fortranobject.c
In file included from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822:0,
                 from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /tmp/tmppx24ffrg/src.linux-x86_64-3.6/fortranobject.h:13,
                 from /tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.c:16:
/usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it with " \
  ^~~~~~~
In file included from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822:0,
                 from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /tmp/tmppx24ffrg/src.linux-x86_64-3.6/fortranobject.h:13,
                 from /tmp/tmppx24ffrg/src.linux-x86_64-3.6/fortranobject.c:2:
/usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it with " \
  ^~~~~~~
/tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.c: In function 'cb_obj_func_in___user__routines':
/tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.c:361:10: warning: unused variable 'f' [-Wunused-variable]
   double f=(*f_cb_capi);
          ^
At top level:
/tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.c:128:12: warning: 'f2py_size' defined but not used [-Wunused-function]
 static int f2py_size(PyArrayObject* var, ...)
            ^~~~~~~~~
compiling Fortran sources
Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops
Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops
Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops
compile options: '-I. -I/tmp/tmppx24ffrg/src.linux-x86_64-3.6 -I/usr/local/lib/python3.6/dist-packages/numpy/core/include -I/usr/include/python3.6m -c'
gfortran:f90: Curvif_simplified.f90
/usr/bin/gfortran -Wall -g -Wall -g -shared /tmp/tmppx24ffrg/tmp/tmppx24ffrg/src.linux-x86_64-3.6/curvif_simplifiedmodule.o /tmp/tmppx24ffrg/tmp/tmppx24ffrg/src.linux-x86_64-3.6/fortranobject.o /tmp/tmppx24ffrg/Curvif_simplified.o Curvif.o Rutf.o Rut.o -L/usr/lib/gcc/x86_64-linux-gnu/7 -L/usr/lib/gcc/x86_64-linux-gnu/7 -lgfortran -o ./curvif_simplified.cpython-36m-x86_64-linux-gnu.so
Removing build directory /tmp/tmppx24ffrg
CURVI files compiled.
Generated CURVIF python binary.
[Pipeline] sh
+ export HOME=/var/lib/jenkins1/ws/OMSens_PR-21
+ pytest -v --junit-xml=py3.xml testing
============================= test session starts ==============================
platform linux -- Python 3.6.9, pytest-7.0.1, pluggy-1.0.0 -- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /var/lib/jenkins1/ws/OMSens_PR-21
collecting ... collected 35 items

testing/test_build_model.py::TestsBuildModel::test_builder_works_correctly_for_correct_inputs PASSED [  2%]
testing/test_curvi.py::TestIndividualSensitivityAnalysis::test_curvi_bounds_work PASSED [  5%]
testing/test_curvi.py::TestIndividualSensitivityAnalysis::test_curvi_epsilon_works PASSED [  8%]
testing/test_curvi.py::TestIndividualSensitivityAnalysis::test_curvi_finds_minimum_of_cuadratic PASSED [ 11%]
testing/test_curvi.py::TestIndividualSensitivityAnalysis::test_curvi_irrelevant_dimension PASSED [ 14%]
testing/test_curvi.py::TestIndividualSensitivityAnalysis::test_curvi_max_instead_of_min PASSED [ 17%]
testing/test_curvi.py::TestIndividualSensitivityAnalysis::test_curvi_x0_of_size_larger_than_one PASSED [ 20%]
testing/test_dynamic_sens_matrix.py::TestsW3SensToMatrixInputOutput::test_empty_csvstring_raises_exception PASSED [ 22%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_2_params_2_vars_one_year_but_repeated_param_and_var PASSED [ 25%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_2_params_3_vars_one_year PASSED [ 28%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_one_param_2_vars_one_year_1_value PASSED [ 31%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_one_param_one_var_5_years PASSED [ 34%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_one_param_one_var_one_year PASSED [ 37%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_one_param_one_var_one_year_3_values PASSED [ 40%]
testing/test_dynamic_sens_matrix.py::TestsW3TheoSensToMatrixProccessing::test_one_param_one_var_one_year_but_invalid_year PASSED [ 42%]
testing/test_indiv_sens.py::TestIndividualSensitivityAnalysis::test_different_shapes_raises_error PASSED [ 45%]
testing/test_indiv_sens.py::TestIndividualSensitivityAnalysis::test_multiple_tests PASSED [ 48%]
testing/test_indiv_sens.py::TestIndividualSensitivityAnalysis::test_perturbation_and_analysis_integration PASSED [ 51%]
testing/test_indiv_sens.py::TestIndividualSensitivityAnalysis::test_sens_run_gives_correct_results PASSED [ 54%]
testing/test_model_optimizer.py::TestVectorialSensitivityAnalysis::test_epsilon_works PASSED [ 57%]
testing/test_model_optimizer.py::TestVectorialSensitivityAnalysis::test_lower_bounds_work PASSED [ 60%]
testing/test_model_optimizer.py::TestVectorialSensitivityAnalysis::test_multiple_params PASSED [ 62%]
testing/test_model_optimizer.py::TestVectorialSensitivityAnalysis::test_one_param_max PASSED [ 65%]
testing/test_model_optimizer.py::TestVectorialSensitivityAnalysis::test_one_param_min PASSED [ 68%]
testing/test_model_optimizer.py::TestVectorialSensitivityAnalysis::test_upper_bounds_work PASSED [ 71%]
testing/test_multiparam_sweep.py::TestMultiparameterSweep::test_values_subtests PASSED [ 74%]
testing/test_plot_heatmaps.py::TestPlotHeatmap::test_heatmap_has_columns_sorted PASSED [ 77%]
testing/test_plot_heatmaps.py::TestPlotHeatmap::test_heatmap_has_parameters_sorted PASSED [ 80%]
testing/test_plot_heatmaps.py::TestPlotHeatmap::test_heatmap_plot_creates_files_in_folder PASSED [ 82%]
testing/test_plot_sweep.py::TestSweepPlot::test_plot_sweep_creates_files_in_folder PASSED [ 85%]
testing/test_plot_vectorial.py::TestVectorialPlot::test_plot_vectorial_creates_files_in_folder PASSED [ 88%]
testing/test_predefined_json_files.py::TestsPredefinedJSONFiles::test_run_all_indiv_sens_json_files PASSED [ 91%]
testing/test_predefined_json_files.py::TestsPredefinedJSONFiles::test_run_all_sweep_JSON_files PASSED [ 94%]
testing/test_run_omc.py::TestsRunOMC::test_omc_builds_a_model_correctly PASSED [ 97%]
testing/test_run_omc.py::TestsRunOMC::test_omc_loads_a_model_correctly PASSED [100%]

=============================== warnings summary ===============================
modelica_interface/run_omc.py:40
  /var/lib/jenkins1/ws/OMSens_PR-21/modelica_interface/run_omc.py:40: DeprecationWarning: invalid escape sequence \.
    regex = '.*\.(c|o|h|makefile|log|libs|json)$'

.local/lib/python3.6/site-packages/Pillow-9.0.1-py3.6-linux-x86_64.egg/PIL/_imaging.py:3
  /var/lib/jenkins1/ws/OMSens_PR-21/.local/lib/python3.6/site-packages/Pillow-9.0.1-py3.6-linux-x86_64.egg/PIL/_imaging.py:3: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses

misc/csv_output_to_csv_matrix_converter.py:55
  /var/lib/jenkins1/ws/OMSens_PR-21/misc/csv_output_to_csv_matrix_converter.py:55: DeprecationWarning: invalid escape sequence \$
    w3TheoSens_regex = "\$Sensitivities\..*"

analysis/indiv_sens.py:326
  /var/lib/jenkins1/ws/OMSens_PR-21/analysis/indiv_sens.py:326: DeprecationWarning: invalid escape sequence \w
    value = re.sub('[^\w\s-]', '', value).strip().lower()

analysis/indiv_sens.py:327
  /var/lib/jenkins1/ws/OMSens_PR-21/analysis/indiv_sens.py:327: DeprecationWarning: invalid escape sequence \s
    value = re.sub('[-\s]+', '-', value)

testing/test_model_optimizer.py:84
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_model_optimizer.py:84: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_model_optimizer.py:115
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_model_optimizer.py:115: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_model_optimizer.py:143
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_model_optimizer.py:143: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_model_optimizer.py:167
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_model_optimizer.py:167: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_model_optimizer.py:195
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_model_optimizer.py:195: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_plot_heatmaps.py:74
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_plot_heatmaps.py:74: DeprecationWarning: invalid escape sequence \.
    regex = '.*\.(png|svg)$'

testing/test_plot_heatmaps.py:88
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_plot_heatmaps.py:88: DeprecationWarning: invalid escape sequence \ 
    param_3,7,8,9"""

testing/test_plot_sweep.py:38
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_plot_sweep.py:38: DeprecationWarning: invalid escape sequence \.
    regex = '.*\.(png|svg)$'

testing/test_plot_vectorial.py:51
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_plot_vectorial.py:51: DeprecationWarning: invalid escape sequence \.
    regex = '.*\.(png|svg)$'

testing/test_predefined_json_files.py:28
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_predefined_json_files.py:28: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_predefined_json_files.py:47
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_predefined_json_files.py:47: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

testing/test_run_omc.py:48
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_run_omc.py:48: DeprecationWarning: invalid escape sequence \.
    if re.match('.*\.(c|o|h|makefile|log|libs|json)$', x):

testing/test_run_omc.py:35
  /var/lib/jenkins1/ws/OMSens_PR-21/testing/test_run_omc.py:35: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo?  You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
    @pytest.mark.slow

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
-------- generated xml file: /var/lib/jenkins1/ws/OMSens_PR-21/py3.xml ---------
================== 35 passed, 18 warnings in 69.23s (0:01:09) ==================
[Pipeline] junit
Recording test results
[Checks API] No suitable checks publisher found.
[Pipeline] }
$ docker stop --time=1 cb314706305ddb75915d8b93e2d7b095724d92b043393f9eb692c6ad7fb2b381
$ docker rm -f cb314706305ddb75915d8b93e2d7b095724d92b043393f9eb692c6ad7fb2b381
[Pipeline] // withDockerContainer
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] End of Pipeline

GitHub has been notified of this commit’s build result

Finished: SUCCESS